Publications

Publications include peer-reviewed literature, books, datasets, and software.

Last updated October 26, 2026

We keep this list by hand, so for anything newer see Google Scholar (opens in a new tab)

2026

Artificial Intelligence-Enabled Detection and Management of Physiological Instability in Heart Failure: Results of the Randomized LINK-HF2 Trial

Sideris K, Schmalfuss C, Lewis N, Sallam K, Bozkurt B, Hanff TC, Young MT, Schofield R, Kyriakopoulos CP, Hanson H, Brinker L, Wohlfahrt P, Mehra MR, Curry T, Knecht C, Tuckett S, Nelson RE, Zickmund SL, Butler JM, Edelberg JM, Kurio GH, Wegerich S, Serghiou S, Pipke M, Stehlik J

DOI: 10.1016/j.jchf.2026.103422

JACC: Heart Failure Journal article

2025

Clinical Associations with Lenticulostriatal Vasculopathy (LSV) at Birth: A Case–Control Study

Kyriakopoulou A, Samikos K, Kanavaki A, Alexopoulou E, Argyropoulou M, Psaltopoulou T, Kanaka-Gantenbein C, Dinopoulos A, Giorgi M, Antoniadou A, Filippa I, Siafakas N, Serghiou S, Papaevangelou V

DOI: 10.3390/children12020223

Children Journal article

Assessment of Transparency Across Articles in Ecology and Evolutionary Biology Journals, 2000-2024

Purgar M, Serghiou S, Čulina A, Tarandek A, Vidić R, Wallach JD

Congress of the European Society for Evolutionary Biology (ESEB) Conference abstract

2024

Quantifying urban park use in the USA at scale: empirical estimates of realised park usage using smartphone location data

Young MT, Vispute S, Serghiou S, Kumok A, Shah Y, Lane KJ, Black-Ingersoll F, Brochu P, Bharel M, Skenazy S, Karthikesalingam A, Bavadekar S, Kansal M, Shekel T, Gabrilovich E, Wellenius GA

DOI: 10.1016/s2542-5196(24)00125-6

The Lancet Planetary Health Journal article

Urban Park Use in the United States at Census Tract 2017-2021

Young MT, Vispute S, Serghiou S, Kumok A, Shah Y, Lane KJ, Black-Ingersoll F, Brochu P, Bharel M, Skenazy S, Karthikesalingam A, Bavadekar S, Kansal M, Shekel T, Gabrilovich E, Wellenius GA

DOI: 10.7910/DVN/K71AJS

Harvard Dataverse Dataset

Identifying Clinical Stability After Heart Failure Discharge: A machine learning-based decision aid based on continuous ECG and accelerometry

Martin C, Sideris K, Cacho-Soblechero M, Sekaric J, Hanff T, Schmalfuss C, Lewis N, Sallam K, Hanson H, Brinker L, Pipke M, Perez Alday EA, Alla S, Steinhubl S, Edelberg J, Koren M, Wegerich S, Kurio G, Serghiou S, Stehlik J

DOI: 10.1161/circ.150.suppl_1.4138176

Circulation Conference abstract

2023

Featured

Deep Learning for Epidemiologists: An Introduction to Neural Networks

Serghiou S, Rough K

DOI: 10.1093/aje/kwad107

American Journal of Epidemiology Review

Lessons learnt from registration of biomedical research

Serghiou S, Axfors C, Ioannidis JPA

DOI: 10.1038/s41562-022-01499-0

Nature Human Behaviour Journal article

Identifying COVID-19 Vaccine Deserts and Ways to Reduce Them: A Digital Tool to Support Public Health Decision-Making

Weintraub RL, Miller K, Rader B, Rosenberg J, Srinath S, Woodbury SR, Schultheiss MD, Kansal M, Vispute S, Serghiou S, Flores G, Kumok A, Shekel T, Gabrilovich E, Ahmad I, Chiang ME, Brownstein JS

DOI: 10.2105/ajph.2022.307198

American Journal of Public Health Journal article

metareadr: An R package to read meta-data from the web

Serghiou S

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GitHub Software

2022

Systemic Complement Activation Profiles in Nonexudative Age-Related Macular Degeneration: A Meta-Analysis

Lin JB, Serghiou S, Miller JW, Vavvas DG

DOI: 10.3390/jcm11092371

Journal of Clinical Medicine Journal article

Systemic Complement Activation Profiles in Nonexudative Age-Related Macular Degeneration: A Systematic Review

Lin JB, Serghiou S, Miller JW, Vavvas DG

DOI: 10.1016/j.xops.2022.100118

Ophthalmology Science Journal article

2021

Featured

Assessment of transparency indicators across the biomedical literature: how open is open?

Serghiou S, Contopoulos-Ioannidis DG, Boyack KW, Riedel N, Wallach JD, Ioannidis JPA

DOI: 10.1371/journal.pbio.3001107

PLoS Biology Journal article

Featured

Open, rigorous and reproducible research: A practitioner's handbook

Card D, Min Y, Serghiou S

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Stanford Data Science Book

Large Pediatric Randomized Clinical Trials in ClinicalTrials.gov

Cho SM, Serghiou S, Ioannidis JPA, Klassen TP, Contopoulos-Ioannidis DG

DOI: 10.1542/peds.2020-049771

Pediatrics Journal article

Risk score learning for COVID-19 contact tracing apps

Murphy K, Kumar A, Serghiou S

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Proceedings of Machine Learning Research Journal article

Privacy-first health research with federated learning

Sadilek A, Liu L, Nguyen D, Kamruzzaman M, Serghiou S, Rader B, Ingerman A, Mellem S, Kairouz P, Nsoesie EO, MacFarlane J, Vullikanti A, Marathe M, Eastham P, Brownstein JS, y Arcas BA, Howell MD, Hernandez J

DOI: 10.1038/s41746-021-00489-2

npj Digital Medicine Journal article

Media and social media attention to retracted articles according to Altmetric

Serghiou S, Marton RM, Ioannidis JPA

DOI: 10.1371/journal.pone.0248625

PLoS One Journal article

clinicaltrialr: An R package to extract data from ClinicalTrials.gov

Serghiou S

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GitHub Software

2020

Antenatal imaging and clinical outcome in congenital CMV infection: A field-wide systematic review and meta-analysis

Kyriakopoulou A, Serghiou S, Dimopoulou D, Arista I, Psaltopoulou T, Dinopoulos A, Papaevangelou V

DOI: 10.1016/j.jinf.2020.02.012

The Journal of Infection Journal article

Evaluation of confounding in epidemiologic studies assessing alcohol consumption on the risk of ischemic heart disease

Wallach JD, Serghiou S, Chu L, Egilman AC, Vasiliou V, Ross JS, Ioannidis JPA

DOI: 10.1186/s12874-020-0914-6

BMC Medical Research Methodology Journal article

Calibrating the Scientific Ecosystem Through Meta-Research

Hardwicke TE, Serghiou S, Janiaud P, Danchev V, Crüwell S, Goodman SN, Ioannidis JPA

DOI: 10.1146/annurev-statistics-031219-041104

Annual Review of Statistics and Its Application Review

rtransparent: An R package that automatically identifies and extracts indicators of transparency from the published literature

Serghiou S

View publication

GitHub Software

2019

Featured

Random-Effects Meta-analysis: Summarizing Evidence With Caveats

Serghiou S, Goodman SN

View publication

JAMA Guide to Statistics and Methods, 1st Edition Book chapter

Random-Effects Meta-analysis: Summarizing Evidence With Caveats

Serghiou S, Goodman SN

DOI: 10.1001/jama.2018.19684

JAMA Review

New clinical trial designs in the era of precision medicine: An overview of definitions, strengths, weaknesses, and current use in oncology

Janiaud P, Serghiou S, Ioannidis JPA

DOI: 10.1016/j.ctrv.2018.12.003

Cancer Treatment Reviews Review

2018

Variation in Interleukin 6 Receptor Gene Associates With Risk of Crohn's Disease and Ulcerative Colitis

Parisinos CA, Serghiou S, Katsoulis M, George MJ, Patel RS, Hemingway H, Hingorani AD

DOI: 10.1053/j.gastro.2018.05.022

Gastroenterology Journal article

Altmetric Scores, Citations, and Publication of Studies Posted as Preprints

Serghiou S, Ioannidis JPA

DOI: 10.1001/jama.2017.21168

JAMA Journal article

2016

Long noncoding RNAs as novel predictors of survival in human cancer: a systematic review and meta-analysis

Serghiou S, Kyriakopoulou A, Ioannidis JPA

DOI: 10.1186/s12943-016-0535-1

Molecular Cancer Journal article

Field-wide meta-analyses of observational associations can map selective availability of risk factors and the impact of model specifications

Serghiou S, Patel CJ, Tan YY, Koay P, Ioannidis JPA

DOI: 10.1016/j.jclinepi.2015.09.004

Journal of Clinical Epidemiology Journal article

Comparative assessment of phototherapy protocols for reduction of oxidative stress in partially transected spinal cord slices undergoing secondary degeneration

Ashworth BE, Stephens E, Bartlett CA, Serghiou S, Giacci MK, Williams A, Hart NS, Fitzgerald M

DOI: 10.1186/s12868-016-0259-6

BMC Neuroscience Journal article

2015

Risk of Bias in Reports of In Vivo Research: A Focus for Improvement

Macleod MR, McLean AL, Kyriakopoulou A, Serghiou S, de Wilde A, Sherratt N, Hirst T, Hemblade R, Bahor Z, Nunes-Fonseca C, Potluru A, Thomson A, Baginskaite J, Egan K, Vesterinen H, Currie GL, Churilov L, Howells DW, Sena ES

DOI: 10.1371/journal.pbio.1002273

PLoS Biology Journal article

2013

Sensitivity to cuteness in baby faces is not influenced by pregnancy

Marwick KFM, Rodes KJ, Serghiou S, Steel RM, Campbell A, Hall J, Sprengelmeyer R

The Lancet Conference abstract